Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846493.1_cds_XP_016509660.1_22583
CDS Infomation

[gene=LOC107827113] [db_xref=GeneID:107827113] [protein=zinc finger MYM-type protein 1-like] [protein_id=XP_016509660.1] [location=join(75812..76049,76205..77558,77778..78058,78297..78529)] [gbkey=CDS]
Sequence

ATGAAGAGATTTTATCCTCTGGTATCTTCCAAGTTGCCACAATCAAGTTCATCCTCTCTA
ATTGTTACTCCCGTGGAAAAACATTTGAACCAATTAGTAGAACAACCTCAATCCTCTAAA
AAACAAAGACAAGGAATAGATCTCGATTCTTTAAAGACTGATCCAAAGGAGAGATTACCC
ATTAGAGACTTTCATCCAAATGAGCGTGATGAGATTAGAAGAGAATACCTCCGAAGAGAT
GAAGGCATTCATCAAGGTGGAGGTGATGTATTTTCAAGTTTAGGATTTAAGAGCTGGCAC
AAAAAGAACATATTAGATATGCATGGGTCGAGCAGTATTCATAATCAGGCAACAAGGAAA
TGTGAAGATCTATTAAAACAAAAACAGTCAATTCAAACTTCATTTGATAGGCAATCCACT
CAAACCAAGCTCGAATACAAAATTTGCTTGAAGGCTTCAATTGAGGTGGTGAGACTCCTA
TTGAATCAAGGATTGGCGTTCCGTGGACATCGTGAAGATGAATCATCATTAAACAAGGGT
AACTTTCTTGAGATTCTTTCATGGTATGCAGAGAGGTGCGATAAAATTCGTGATCTTGTG
TTGAAAAAGGCTCCAAAGAATGATCAGTTGACTTCTCATAAAATTCAGAAAGACATTATC
ATTGCATGTAAAATTGAAACAGTTAAAGCAATTATGGACGATCTAAATGGAGACTTTTTT
GCATTGCTAGTTGATGAATCATGTGATGTATCACGCAAAGAGCAATTAGCTATTATCATG
CGATATGTTAATAGATGCGGATCTGTGGTGGAGCATTTTATTAGGATCGTTCAAGTTCGT
AATACTACTGCTTTGTGTTTAAAGAAAGCAATTGTTGATTACCTTGCTCAACATTCTTTG
AATTTATCTTATGTGCGTGGACAGTGCTATGATGGAGCAAGCAACATGCAAGGGGATTTA
CGTGGCCTCAAAACTTTGATTCAACAAGAAAGTAAATCTGCTTATTCCATTCATTGTTTT
GCACACCAACTTCAATTGACTCTTGTTGCGGTATCCAAAAAGTGTCTTGAAGTGGGAGAA
CTTGTATTGTTGGTTTCTAATGTATTGAATATAGTGGGAGGTTCTTTTAAACGTATGGAT
GATCTTCGAGAATCTCAAGCAGAAAAAGTTCAAGAGGCATTAGACATGGGTGAACTTGAA
ACTGGTAGGGGTTTGAATCAAGAACTTGGTCTTGCTAGAGCTGCCGATACTCGTTGGGGT
TCGCACTACAAATCTTTTAAGAACTTTATTTCTATGTTTGGCTCAATTATTGATGTTCTT
GATACTATCGTTGTTGATGCCCGGACTTTAGAAGAAAGAGCTAAGGCAAAGGGGTATCTT
AGCACTTGTCAAACATTTGAGGTTGCTTTCATGTTGCACCTAATGAGAGATGTTTTGGGG
ATCACAAATGAACTTAATACATCCTTACAAAAAAAGGAGCAAGATATTGCAAATGCTATT
CTACTTGTTGAAGTGGCAAAGAGATGGTTGCAAAAGTTAAGAGAAGAAGAATGGGATTCA
CTTATTGATAAGGTATCTGCATTTTGTGTCAATTTTAACATAAACAAGATATTGAGGATG
GCTGAATTGTATCCTGATGATTTTGATGAGAATATAACGGTTACACTCAAGAATCAGCTT
GAAACTTATATTGTTGATCTTTCTGTAACACTAGTTAAAACAAAGAAGCATTTGAATTAT
CCATTTGTGTTTTACCTTGTGAAATTTGCTTTGCTTCTACCTGTTGCCACTGCTACCGTT
GAAAGAACTTTTTCGGCGATGAAATTGATCAAGAGTGAATTGCGAAACCGAATGAATGAC
GAATTCATGAGCGAGGAGCTTCAATGTTTGGAACTCCAGCAACATTCCGCTATTTCATAC
CACACTCTGGCCGGTGGGCATTCTCCAACGTCTCTTCGTTTCAAGGGTCATGTTTGTGGA
ATGCCGGTACAGGTTATGGTGGATAATGGGAGCACGCACAATTTTGTGCAAAGTAGAGCT
GCTAAGTTCTTTAACTTGGTTGTTTCACCGGTTACACCATGTTCTGTGGTGGTTGGTAGT
GGTTAG

Peptide Sequence

PEP ID

XP_016509660.1
PEP Infomation

PREDICTED: zinc finger MYM-type protein 1-like [Nicotiana tabacum]
Sequence

MKRFYPLVSSKLPQSSSSSLIVTPVEKHLNQLVEQPQSSKKQRQGIDLDSLKTDPKERLP
IRDFHPNERDEIRREYLRRDEGIHQGGGDVFSSLGFKSWHKKNILDMHGSSSIHNQATRK
CEDLLKQKQSIQTSFDRQSTQTKLEYKICLKASIEVVRLLLNQGLAFRGHREDESSLNKG
NFLEILSWYAERCDKIRDLVLKKAPKNDQLTSHKIQKDIIIACKIETVKAIMDDLNGDFF
ALLVDESCDVSRKEQLAIIMRYVNRCGSVVEHFIRIVQVRNTTALCLKKAIVDYLAQHSL
NLSYVRGQCYDGASNMQGDLRGLKTLIQQESKSAYSIHCFAHQLQLTLVAVSKKCLEVGE
LVLLVSNVLNIVGGSFKRMDDLRESQAEKVQEALDMGELETGRGLNQELGLARAADTRWG
SHYKSFKNFISMFGSIIDVLDTIVVDARTLEERAKAKGYLSTCQTFEVAFMLHLMRDVLG
ITNELNTSLQKKEQDIANAILLVEVAKRWLQKLREEEWDSLIDKVSAFCVNFNINKILRM
AELYPDDFDENITVTLKNQLETYIVDLSVTLVKTKKHLNYPFVFYLVKFALLLPVATATV
ERTFSAMKLIKSELRNRMNDEFMSEELQCLELQQHSAISYHTLAGGHSPTSLRFKGHVCG
MPVQVMVDNGSTHNFVQSRAAKFFNLVVSPVTPCSVVVGSG

Transcript Sequence

Gene sequence data has not been registered.